Browse of TCMCG005C04110 protein

CDS

Accession Number	TCMCG005C04110
gbkey	CDS
Protein Id	XP_020268644.1
Location	join(128617545..128617548,128617686..128617759,128618310..128618445,128618587..128618632,128622362..128622419,128624885..128625037,128626674..128626793,128626887..128627052,128629688..128629800,128629994..128630065,128630296..128630517,128632617..128632675,128632775..128632859,128633001..128633138,128634736..128634960,128635059..128635867,128635964..128636057,128636728..128637075)
Gene	LOC109844016
GeneID	109844016
Organism	Asparagus officinalis

Protein

Length	973aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020413055.1
Definition	protein RRC1-like isoform X1

EGGNOG-MAPPER Annotation

COG_category	A
Description	U2 snRNP-associated SURP motif-containing
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K12842        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03040        [VIEW IN KEGG] map03040        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAGATGAGCTTCTCTATGAATCGAAAGAAGACTCCTTTTCAGAAGCATCGAGAAGAGGAAGAAGCCAAGAAGAAGAAAGCTGAGGATGAGACTGCTCGATTGTATGCTGAATTTGTGGAGTCATTTCAAGCGAATGATGCACCTGGTTCAAAGCCTTTTGTTAGAGGAGGGTTGATTAATCCAAATGAAAAGCTGAAGGCAGACTCAGAAGGTGGAAATTCCAAAGATGGGCTATCTGTTCCAAAGAAGGGAACTAGGTATGTGCCATCCTTCTTACCTCCACCTTCTAATAAAGAGAGAGAACCTGAGAAAAAGAGGGAGGATGGAAGGCCAAAGGAGAAGGAGAAAGGAAAATCACGTGCCATTGATAATTTTTTGGAAGAGCTGAAGTTTGAACAAGAGCTCAGGGAGAAGCGTAATCAAGAACGTGAACAACGGCGCGAAGGACGCCATGGTGATACTTCTGCTCCGCCAACACGTTTTGACGAACTGCCTGATGAGTTTGATCCAAGTGGAAAACTTCTAGGATCATTTGATGATGGGGATCCCCAGACTACAAATTTGTATGTTGGGAATCTTTCACCACAGGTGGATGAAAATTTTCTATTAAGGACGTTTGGAAGGTTTGGGCCCATAGCTAGTGTGAAAATAATGTGGCCTCGAACAGAAGAGGAGCGCAGGAGACAAAGAAATTGTGGCTTTGTTGCATTCATGAACAGAGCTGATGGGCAGGCTGCCATGGATGAGATGCAAGGTGTAGTTGTATATGAGTATGAGTTGAAGATTGGATGGGGTAAGTCTGTATCACTTCCAACACAAGCTCTGCCTGCTCCTCCACCTGGGCACATGGCTATTAGAAACAAGGAGGGCAGCACTGTGATTTTGTCTGGTCCTGCTGGTCCTCCAGTAACTTCCGTGACTAGTCAAAGCTCTGAGTTGGTGCTCACTCCAAATGTTCCAGATATATTAGTTGTTACACCAGAGGATAAACACCTAAGACATGTTATCGACACAATGGCACTGCATGTCCTGGATGGTGGATGTGCCTTTGAGCAAGCTGTTATGGAGAGAGGTCGTGGGAATCCTCTTTTTAATTTCCTATTTGAGCTTGGATCTAAAGAACATACATATTATGTTTGGAGACTCTATTCCTTTGCTCAGGGTGATACACTTCAGCGATGGAGGACAGAGCCTTTTATCATGATCACTGGTAGCGGAAGATGGATTCCACCATCTTTGCCATCAATTCGAAGTCCAGAGCATGAAAAAGATGCAACCACGACATATGCAGCTGGCAGAAGCAGGCGTATAGAGTTGGAGAGAACTCTCACAGATCCACAACGAGATGAATTTGAGGATATATTGCGTTCCTTAACTTTAGAGAGGAGCCAAATAAAAGAAGTTATGGGTTTTGCTTTGGACAATGCAGATGCAGCTGGAGAGGTGGTTGAGGTCCTTACAGAATCGTTGACGCTTAAAGAAACACCTATACCAACTAAGGTTGCAAGGCTTATGCTTGTTTCTGATATCCTCCATAACAGTAGCGCTCCAGTGAAAAATGCTTCTGCTTATCGGACAAAATTCGAAGCAACACTACCAGACATAATGGAGAGTTTCAATGACTTGTATTGTAGTATCACAGGAAGGATCACTGCTGAGGCCCTCAAGGAACGAGTTTTAAAGGTTCTTCAGGTATGGGCAGATTGGTTTCTCTTTTCTGATGCATACGTCAGCGGTCTGCGTGCTACATTCCTTCGATCAGGGAACTCAGGCGTCATACCTTTCCATTCTATATGTGGGGATGCACCTGAAATTGAAAACAGAAGTAGTTCCGAGGATCTTTCTGTAGGGAACAAGATTAACCAAGATACTGCATTGGCCATGGGGAAGGGAGCAGCCATGCAGGAGCTATTAGGTCTTCCGCTTACTGAACTGGAAAGACGATGCAGGCACAATGGTCTATCTCTTTGTGGTGGTAGGGAAATAATGGTTGCAAGATTGCTGAATCTAGAGGAAGCAGAAAAACAAAGTGGGTATGACCGAGATGATGGCATGAGATACCTACAAAGCCGTTCTGGCAAATATCCAAGAGAGGATGATAGTTTGGACCATAGGGAACCCAACCATGGGACTCAACCAGATAATTCTAGCACATGGAATGAACATGATGAGCTAGAAGATATGAATGTTTCTTCCGTCTCTTTAGCGCAAACATTTTCAATTCCTCAGCCTGAGTTAAGATCATTTCCAAGCAAGACAGTAAAGTCTGACCCTGTATTGCCAGCTTCGAAGTGGGCCCGTGAGGATGATGGCAGTGATGATGAAGATAAAAAAGGCGGTCGAGGTTTAGGTTTAAGTTATTCTTCATCCGGAAGTGATAATGCTGGAGGTGATCTCGAGAAGGAAGATGAGGCAGAGGTGGCAACTGATTCTGGCAGTCTTCCTCGTCCGGAAAGCAACATGAGTGAAGAGCAGAGACAGAAACTTAGGCGATTAGAGGTTGCTGTAATGGAATACCGGGAGACTCTTGAAGAAAGAGGCATCCAGAATCCTGAAGACATAGAGAAGAAGAGAGAACTTCTATGGAGAGGAAAGGGAGGCGTGATGATGGTCTTGATTCTTCAAGGAAGAGGCACCGTAGCCAGAGTAGAAGTCATAGCCCACAGAAGAGGTCATTGGCCAGAGAAAGAGAGAACGACGCAGACAGGAATCGGGATAAAAGAAGGGAGCGTGAGAAGAGCGGGAGCAGAGATAGAGATGATCTCGAGAAGGATAGAACCAGAGAAAGGGACAGAGATAGGAGAAGAAGGGGAATATGACTGGCAAAAAGTGGTAACTGTTGATGGCCAACCCATAAAAGTTGGTTCCTTGGTTATGGACACTTCCTTAAGCCTATGTTTATGGTTTGAGTTTCGGTAA

Protein:   MQMSFSMNRKKTPFQKHREEEEAKKKKAEDETARLYAEFVESFQANDAPGSKPFVRGGLINPNEKLKADSEGGNSKDGLSVPKKGTRYVPSFLPPPSNKEREPEKKREDGRPKEKEKGKSRAIDNFLEELKFEQELREKRNQEREQRREGRHGDTSAPPTRFDELPDEFDPSGKLLGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAMDEMQGVVVYEYELKIGWGKSVSLPTQALPAPPPGHMAIRNKEGSTVILSGPAGPPVTSVTSQSSELVLTPNVPDILVVTPEDKHLRHVIDTMALHVLDGGCAFEQAVMERGRGNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPSIRSPEHEKDATTTYAAGRSRRIELERTLTDPQRDEFEDILRSLTLERSQIKEVMGFALDNADAAGEVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLYCSITGRITAEALKERVLKVLQVWADWFLFSDAYVSGLRATFLRSGNSGVIPFHSICGDAPEIENRSSSEDLSVGNKINQDTALAMGKGAAMQELLGLPLTELERRCRHNGLSLCGGREIMVARLLNLEEAEKQSGYDRDDGMRYLQSRSGKYPREDDSLDHREPNHGTQPDNSSTWNEHDELEDMNVSSVSLAQTFSIPQPELRSFPSKTVKSDPVLPASKWAREDDGSDDEDKKGGRGLGLSYSSSGSDNAGGDLEKEDEAEVATDSGSLPRPESNMSEEQRQKLRRLEVAVMEYRETLEERGIQNPEDIEKKRELLWRGKGGVMMVLILQGRGTVARVEVIAHRRGHWPEKERTTQTGIGIKEGSVRRAGAEIEMISRRIEPEKGTEIGEEGEYDWQKVVTVDGQPIKVGSLVMDTSLSLCLWFEFR